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Gut-Immune Axis

Peyer patches, M cells, IgA in lumen; ~70% of immune cells reside in gut.

A free, animated gut-immune axis you can read here or embed on any website, from Scrollchart.

Gut-Immune Axis

Gut-Immune AxisM cells, Peyer's patches, and secretory IgA: ~70 percent of body immune cells reside in gut tissue1. Antigen sampling2. Peyer's patch3. Class switch4. pIgR transport5. Secretory IgAGut lumen (microbes + dietary antigens)MpIgRIntestinal epithelium (tight-junctioned enterocytes; M cells overlie Peyer patch)antigen transcytosisLamina propria with Peyer patch (organised lymphoid follicle)Peyer's patchDCTfhIgMTGF-beta + IL-21AID-driven CSRIgA+plasma celldimeric IgASecretory IgA (sIgA) in lumenScale of GALT~70% of all immune cells3 to 5 g IgA secreted / day~100 trillion gut microbes200 m^2 surface areaTolerance + defense balancedby Tregs and sIgA exclusion.Dysbiosis or barrier breach leaks LPS into circulation, driving systemic low-grade inflammation.IgA coats commensals (immune exclusion) without inflammation; switches to IgG against true invaders.

Small intestine cross-section showing M cell sampling lumen, dendritic cell taking up antigen, Peyer patch B cell class-switching to IgA, IgA secretion into lumen by epithelial pIgR.

Good for

  • Gut health and microbiome content for health and nutrition blogs
  • Mucosal immunity and IgA explainers for medical education
  • Leaky gut and chronic inflammation mechanism articles

Source & accuracy

This gut-immune axis is an editorial illustration built to represent the concept accurately. Where it shows figures, they are typical or representative values chosen to make the relationship clear, not a single underlying dataset. The diagram and its explainer are reviewed and maintained centrally, and updated over time as understanding improves.

Why so much immune tissue lines the gut

The intestinal lining faces an enormous surface area exposed to food antigens and trillions of resident microbes. A large share of the body's immune cells sits in or near this tissue, organized as gut-associated lymphoid tissue (GALT). The figure of roughly 70 percent is widely cited as an approximation for the proportion of immune cells associated with the gut; exact numbers vary by definition and source.

The central challenge here is tolerance: the system must stay quiet toward harmless food and commensal bacteria while remaining ready to react to genuine pathogens.

How antigen sampling and secretory IgA work

Peyer patches are organized lymphoid follicles in the small intestine. Specialized M cells overlying them transport samples of luminal contents across the epithelium to immune cells waiting beneath, so the system can survey what is in the gut without breaching the barrier.

Plasma cells in the lining produce secretory IgA, which is exported into the lumen where it binds microbes and toxins and limits their attachment to the epithelium without provoking strong inflammation. This balance of sampling and IgA coating supports tolerance. This is general educational information about gut immunology, not medical advice.

Embed this diagram

Add this animated gut-immune axis to your own site. Copy one line of HTML, or use the embed builder for theme and sizing options.

Reference

What this is
A free, embeddable, animated gut-immune axis for any website.
Who uses it
Medical educators, Health blogs, Biohacker blogs, Nutrition blogs.
How to embed
Copy one line of HTML. No signup. No watermark. Works in WordPress, Webflow, Ghost, Substack, plain HTML.
File size
iframe embed, ~80 KB gzipped (loads on demand, does not block your page paint).
License
Free forever. Editorial explainer text included; updated centrally over time.

Embed format options

Copy the universal HTML snippet, the WordPress shortcode, or an iframe fallback - see the WordPress plugin page for details. Any format keeps the same Core Web Vitals profile and the same explainer text.

Embed snippet
<div data-scrollchart="gut-immune-axis" data-scrollchart-v="1"></div>
<script src="https://scrollchart.com/embed.js" async></script>

Frequently asked questions

Where can I get a free animated "Gut-Immune Axis" for my website?
Scrollchart provides "Gut-Immune Axis" as a free, embeddable animated diagram you can add to any website with one line of HTML. No signup is required and there is no watermark. The diagram and its explainer text are served from scrollchart.com, so the embed stays current without any maintenance on your end.
How do I embed a gut-immune axis diagram in a health or wellness blog?
Copy the HTML snippet from the Scrollchart diagram page and paste it into any post or page in your CMS. It works in WordPress, Webflow, Ghost, Substack, and plain HTML without any plugin or account. The diagram renders as animated SVG directly in your page, so search engines can index the accompanying explainer text.